Publications 2015

Publications 2015

Kaufman K, Jenkins Y, Alomari M, Mirzaei M, Best O, Pascovici D, Mactier S, Mulligan S, Haynes P, Christopherson RI. The Hsp90 inhibitor SNX-7081 is synergistic with fludarabine nucleoside via DNA damage and repair mechanisms in human, p53-negative chronic lymphocytic leukemia. Oncotarget. 2015 Dec 1;6(38):40981-97.

Jankova L, Dent OF, Molloy MP, Chan C, Chapuis PH, Howell VM, Clarke SJ. Reporting in studies of protein biomarkers of prognosis in colorectal cancer in relation to the REMARK guidelines. Proteomics Clin Appl. 2015 Dec;9(11-12):1078-86

Huang PY, Mactier S, Armacki N, Giles Best O, Belov L, Kaufman KL, Pascovici D, Mulligan SP, Christopherson RI. Protein profiles distinguish stable and progressive chronic lymphocytic leukemia. Leuk Lymphoma. 2015 Nov 16:1-11.

Meex RC, Hoy AJ, Morris A, Brown RD, Lo JC, Burke M, Goode RJ, Kingwell BA, Kraakman MJ, Febbraio MA, Greve JW, Rensen SS, Molloy MP, Lancaster GI, Bruce CR, Watt MJ. Fetuin B Is a Secreted Hepatocyte Factor Linking Steatosis to Impaired Glucose Metabolism. Cell Metab. 2015 Oct 20. pii: S1550-4131(15)00480-5.

Penesyan A, Kumar SS, Kamath K, Shathili AM, Venkatakrishnan V, Krisp C, Packer NH, Molloy MP, Paulsen IT. Genetically and phenotypically distinct Pseudomonas aeruginosa cystic fibrosis isolates share a core proteomic signature. PLOS One 2015 Oct 2;10(10):e0138527

Schilter H, Cantemir-Stone CZ, Leksa V, Ohradanova-Repic A, Findlay AD, Deodhar M, Stockinger H, Song X, Molloy M, Marsh CB, Jarolimek W. The mannose-6-phosphate analogue, PXS64, inhibits fibrosis via TGF-β1 pathway in human lung fibroblasts. Immunol Letters 2015, 165(2), 90-101.

Su SP, Song X, Xavier D, Aquilina JA. Age-related cleavages of crystallins in human lens cortical fiber cells generate a plethora of endogenous peptides and high molecular weight complexes. Proteins. 2015 Oct;83(10):1878-86.

Sowmya G, Breen EJ, Ranganathan S. Linking structural features of protein complexes and biological function. Protein Sci, 2015 Sep;24(9):1486-94

George I S, Pascovici D, Mirzaei M, Haynes PA. Quantitative proteomic analysis of cabernet sauvignon grape cells exposed to thermal stresses reveals alterations in sugar and phenylpropanoid metabolism. Proteomics. 2015 Sep;15(17):3048-60

Trewin AJ, Lundell LS, Perry BD, Patil KV, Chibalin AV, Levinger I, McQuade LR, Stepto NK. Effect of N-acetylcysteine infusion on exercise-induced modulation of insulin sensitivity and signaling pathways in human skeletal muscle. Am J Physiol Endocrinol Metab. 2015 Aug 15;309(4):E388-97

Liu SY, Fox G, Khoddami A, Neilson KA, Truong HH, Moss AF and Selle PH, Grain Sorghum: A Conundrum for Chicken-Meat Production Agriculture 2015, 5, 1224-1251;

Truong HH, Neilson KA, McInerney BV, Khoddami A, Roberts TH, Liu SY, Selle PH. Performance of broiler chickens offered nutritionally-equivalent diets based on two red grain sorghums with quantified kafirin concentrations as intact pellets or re-ground mash following steam-pelleting at 65 or 97°C conditioning temperatures Animal Nutrition1(2015)220–228

Percy AJ, Tamura-Wells J, Albar JP, Aloria K, Amirkhani A, Araujo GDT, Arizmendi JM, Blanco FJ, Canals F, Cho J-Y, Colomé-Calls N, Corrales FJ, Domont G, Espadas G, Fernandez-Puente P, Gil C, Haynes PA, Hernáez ML, Kim JY, Kopylov A, Marcilla M, McKay MJ, Mirzaei M, Molloy MP, Ohlund LB, Paik Y-K, Paradela A, Raftery M, Sabidó E, Sleno L, Wilffert D, Wolters JC, Yoo JS, Zgoda V, Parker CE, Borchers CH. Inter-laboratory evaluation of instrument platforms and experimental workflows for quantitative accurancy and reproducibility assessment. EuPA Open Proteomics. 2015, Vol.8, p.6-15

Mahon, K., Lin, H-M., Castillo, L., Lee, B., Lee-Ng, M., Chatfield, M., Chiam, K., Breit,S., Brown, D., Marx, G., Molloy, MP, Pavlakis, N., Boyer, M., Stockler, MR., Daly, R.J., Henshall, S., Horvath, L. Cytokine profiling of docetaxel-resistant castration resistant prostate cancer. Br. J. Cancer 2015, 112, 1340–1348.

Herbert B R, Succar P, Breen E J and Kuah D E K. Alterations in the Secretome of Clinically Relevant Preparations of Adipose-Derived Mesenchymal Stem Cells Co-Cultured with Hyaluronan. Stem Cells International, 2015:2015:421253

Krisp C, Yang H, van Soest R, Molloy MP. Online peptide fractionation using a multiphasic microfluidic LC chip improves reproducibility and detection limits for quantitation in discovery and targeted proteomics. Mol Cell Proteomics. 2015 Jun;14(6):1708-19

Emery S J, Pascovici D, Lacey E, Haynes P A. The generation gap: Proteome changes and strain variation during encystation in Giardia duodenalis. Mol Biochem Parasitol. 2015 May; 201(1):47-56

Parker R, Vella L, Xavier D, Amirkhani A, Parker J, Cebon J, Molloy M. Phosphoproteomic analysis of cell-based resistance to BRAF inhibitor therapy in melanoma. Front. Oncol. 2015, May 15;5:95.

Mahboob S, Ahn SB, Cheruku HR, Cantor D, Rennel E, Fredriksson S, Edfeldt G, Breen EJ, Khan A, Mohamedali A, Muktadir MG, Ranganathan S, Tan S-H, Nice E and Baker MS. A novel multiplexed immunoassay identifies CEA, IL-8 and prolactin as prospective markers for Dukes’ stages A-D colorectal cancers. Clinical Proteomics 2015, April 8;12(1):10.

Martinez-Aguilar J, Clifton-Bligh R, Molloy MP. A multiplexed, targeted mass spectrometry assay of the S100 protein family uncovers the isoform-specific expression in thyroid tumours. BMC Cancer 2015 Mar 29;15:199.

Fernando, N; Panozzo, J; Tausz, M; Norton, R; Fitzgerald, G; Khan, A, Seneweera, S. S. Rising CO2 concentration altered wheat grain proteome and flour rheological characteristics. Food Chem 2015,1;70: 448-454

Breen, E J; Polaskova, V; Khan, A. Bead-based multiplex immune-assays for cytokines, chemokines, growth factors and other analytes: Median fluorescence intensities versus their derived absolute concentration values for statistical analysis. Cytokine 2015 Feb;71(2):188-198.

Kamath, K S; Kumar, S S; Kaur, J; Venkatakrishnan, V; Paulsen, I T; Nevalainen, H; Molloy, M P. Proteomics of hosts and pathogens in cystic fibrosis. Proteomics Clin Appl. 2015 Feb;9(1-2):134-46.
Pascovici D, Song X, Solomon P S, Winterberg B Mirzaei M, Goodchild A, Stanley W C, Liu J and Molloy M P. Combining Protein Ratio p-Values as a Pragmatic Approach to the Analysis of Multirun iTRAQ Experiments. J Proteome Res. 2015, Feb 6;14(2), 738-746.Lin C-H, Chik J H L, Packer N H, Molloy M P. Multidimensional Fractionation is a Requirement for Quantitation of Golgi-Resident Glycosylation Enzymes from Cultured Human Cells. J Proteome Res, 2015, Feb 6;14(2):747-55

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