Dr Tatiana Soares da Costa
Title: Resistance is futile: Overcoming the rise of superbugs and noxious weeds
Abstract: Resistance to current antibiotics and herbicides represents a major threat to global health and food security. Despite a continuous rise in resistance worldwide, no antibiotics or herbicides with a new mode of action have been introduced to the market in over 30 years. In this talk, Tatiana will discuss different strategies her laboratory employs to revitalise the antibiotic and herbicide discovery pipelines with new products to reduce the downstream development of resistance.
Dr Petteri Vihervaara
Title: (Part 1) Outlook on European Biodiversity and Ecosystem Assessments (Part 2) and Multisource and Multiscale Earth Observation of Biodiversity in Boreal Forests
Abstract: Part 1- Finland is a country with relatively advanced monitoring schemes for the biodiversity and ecosystems, but we phase similar challenges with Australia – how to monitor large areas by limited human resources (pop. density 3,3 persons/km2 in AUS, and 17,6 persons/km2 in FIN). As a part of European Union we have repeating reporting needs for species and habitats. Various in situ and remote sensing methods are used to compile information for these assessments. The latest development to provide timely information are compiled in a designed system called the Finnish Ecosystem Observatory (FEO), which has similarities with Australian TERN.
Part 2 - Earth observation techniques to estimate biodiversity in boreal forests are improving rapidly. The aims and selected findings presented here are to: (i) collect cutting-edge EO data at various spatial and temporal; (ii) develop and produce novel remotely sensed indicators of BD variables and variables for C-sequestration. Different variables describing biodiversity and ecosystem properties are produced using a multi-sensor approach. We will utilize 1) optical satellite images (e.g. Sentinel, Landsat), 2) airborne laser scanning and hyperspectral data, and 3) unmanned aircraft systems (UAS). Optical remote sensing covers large geographical areas at 10-30 m spatial resolution and temporal span of several decades. Laser scanning is a superb method to capture the 3D structure of forested ecosystems with sub-meter accuracy and has been used in growing numbers to study wildlife habitats and BD. Hyperspectral data (HySpex) is used to characterize tree species recognition and identification, and to collect information from spectral traits. Integrating multisource and multiscale remote sensing (RS) data and methods allows studying forest BD and C-sequestration related questions in great detail. Novel UAS methods contribute for bridging the gap in EO between field and airborne measurements and providing ultra-high spatial and temporal resolution imagery for detailed assessment of different ecosystems properties. Field data (e.g. species diversity, canopy foliar traits) has been collected from the airborne and UAS sites. Deriving spectral traits from various RS data can provide detailed valuable information for BD research. In addition, the use of lidar data allows studying traits related to forest and vegetation structure in 3D.
Professor Lin Schwarzkopf
Title: …And all the reptiles that crawl upon the earth: an exploration of the consequences of terrestriality.
Abstract: Many organisms are terrestrial, spending time upon the ground, rather than in trees or on rocks. Here I will explore two aspects of the consequences of terrestriality for reptiles, one with respect to a morphological adaptation to living on the ground: the function and evolution of hydrophobic skin, and the other with respect to conservation considerations, examining the impact of grazing on ground-dwelling reptiles (and other vertebrates). Geckos have hydrophobic skin, apparently to provide bacteriocidal and self-cleaning properties, and it appears to evolve in concert with use of the ground as a substrate. Also, arboreal vertebrates are much less effected by (uncleared) grazing than are their arboreal counterparts. Thus, the influence of using terrestrial habitat may be more profound than we have realised.
Professor Nate Lo
Title: Why do insect endosymbiont genomes shrink over evolutionary time?
Abstract: The evolutionary processes that drive variation in genome size across the tree of life remain unresolved. Effective population size (Ne) is thought to play an important role in shaping genome size, a key example being the reduced genomes of insect endosymbiotic bacteria. Such bacteria undergo population bottlenecks during mother-to-offspring transmission, which is believed to result in the accumulation of deleterious mutations via drift, and gradual gene inactivation and loss. However, the existence of reduced genomes in ocean-dwelling and terrestrial bacterial species with large Ne demand an alternative explanation. Here I discuss recent phylogenetic and molecular evolutionary analyses on the genomes of Blattabacterium endosymbionts from cockroaches, and free-living bacteria, that suggest an alternative mechanism leading to genome reduction is at play.
Professor Shinichi Nakagawa
Title: A Behavioural Ecologist Meets Meta-analysis and Falls in Love…
Abstract: Researchers are drowning in the sea of information and publications. Therefore, it is not surprising that research synthesis has become an essential part of science now more than ever. In this talk, I will explain how studying house sparrows on a small island in UK led me to a powerful research synthesis tool, i.e. meta-analysis. This fateful encounter allowed me not only to synthesize but also to generate new hypotheses for many topics in ecology and evolution. Furthermore, our group uniquely started using (bio)medical literature to ask evolutionary questions. As examples of the use of biomedical data, I will share my meta-analytic research on two topics: 1) aging, or how to live long, and 2) the effect of maternal diets on offspring phenotypes. I will finish my talk with my future vision on research synthesis and meta-research (research on research), also introducing “research weaving”, a new research synthesis concept, which we have recently proposed (another byproduct of the encounter).
Professor Bernd Meyer
Title: Task allocation in social insects: computational models reveal that ecologies can drive modes of specialisation.
Abstract: Social insect colonies are examples of outstanding ecological success, partly due to their ability to appropriately balance their colony workforce across a broad range of tasks. Despite its fundamental importance and significant amounts of research, this process of workforce allocation is still not well-understood. Empirical evidence highlights the importance of ecology and social interactions, but most mathematical models focus on internal and individual factors. To address this gap we propose a new mathematical modelling framework for task allocation in social insects that directly incorporates social interactions and environmental conditions as first class elements. Based on this framework we show that ecological conditions are a crucial determinant for the emergence of different forms of specialisation. We also find strong interactions between the prevailing learning mechanisms and colony specialisation. Contrary to intuitive expectation we find that strong specialisation does not always imply to improved colony efficiency. Particularly, social learning appears to lead to high colony performance only in a limited range of environment types and can drive a colony into "over-specialisation" in other conditions. This suggests that social learning should only have evolved in a limited range of environments and for certain tasks. Our theoretical results thus point towards promising new directions for empirical work that can bring us a step closer to understanding how social insects achieve their outstanding ecological success.
Title: Light, Art and The Brain.
Abstract: As rapidly advancing technologies become more widely available, having access to tools that collect biometric data and in particular BCI technology, is providing artists with new ways of exploring our biological selves as well as creating new modes of audience interaction. Laura Jade's artwork Brainlight explores how technology can aesthetically interface with the mind. It integrates biology, lighting design and BCI technology into an interactive brain sculpture, lasercut from transparent perspex and engraved with neural networks. The installation is controlled with a wireless EEG headset which translates the electrical signals from the user’s brain a live neuro-feedback loop, allowing a participant to have an intimate and unique interaction with their inner selves - to “meet their own mind” - externally.
Dr Luana Lins
Title: The evolutionary history of antifreeze proteins, recent research trip to Antarctica.
Dr Ben Ashton
Title: The causes and consequences of individual variation in cognition
Abstract: Social and ecological challenges are hypothesised to be the predominant factors driving cognitive evolution. However, studies addressing the potential role of these factors have produced highly conflicting results. To help resolve this, rather than focusing on interspecific comparisons, I investigated the causes and consequences of individual variation in cognitive ability in the Australian magpie. I will talk about the relationship between individual cognitive performance and a number of social, ecological and physiological parameters.
Prof Michal Kowalewski
Title: Tales Told by Dead Shells: Paleobiological Approaches to Historical Ecology and Conservation.
Abstract: There is a growing realization that the youngest fossil record (the past centuries and millennia) can provide critical insights into the natural state and long-term stability of ecosystems that are currently deteriorating due to human impacts. Using case studies from Mexico, USA, and Italy, we demonstrate that dead skeletal remains such as shells of aquatic mollusks provide a rich biological record of previous centuries and millennia. These records can be used to improve our understanding of natural ecosystems, including their past history and current state. The knowledge gained using this novel approach (Conservation Paleobiology) makes it possible to assess the long-term stability of natural systems, measure the magnitude of recent changes resulting from human impacts, and evaluate the efficacy of restoration efforts.
Dr Georgy Sofronov and Dr Lyndon Koens
Title: Optimal decision rules and other problems / Understanding spirochete dispersal, swimming and deformations.
Abstract: Dr Sofronov: In the first part of my presentation, I will talk about optimal decision rules with applications in animal behaviour problems such as sequential mate choice or optimal choice of the place of foraging. In the second part of my talk, I will give a brief outline of two biology research projects that I have been recently involved in as a statistician: 1) on ontogenesis of epiphytic lichens and 2) analysis of spatial distributions of plants.
Dr Koens: Spirochetes are a phylum of helical bacteria that cause Lyme disease, Leptospirosis and Syphilis. The virulence of spirochetes depends on many mechanical aspects of their motion. This talk will discuss some of the physics of such helical bacteria. Physical models will be constructed to help us understand their dispersal and swimming. I will then explain how recent experiments could help us understand the deformation of their body shape.
Karen Burke da Silva
Title: Teach like a Scientist.
Title: Corals reefs in a changing world – the use of integrative ecological techniques to understand multi-scale reef interactions.
Abstract: Globally, coral reefs are being threatened by declining water quality and climate change. Predicting how reefs will respond to future environmental change, and how we should take measures to protect them into the future, has proved highly controversial and poorly constrained. This multidisciplinary work focuses on understanding how human activities have impacted coral reefs across different scales, from the organism to the ecosystem level. Long lived organisms, such as corals, can open a window to the past helping us to understand how they have responded to past environmental stressors. This data is critical to future reef management. Findings will be presented on constructing environmental histories gleaned from the skeletons of reef building organisms. In addition, the critical role of “bio-engineers”, organisms which shape and sculpt the reef ecosystem, will be expanded upon in order to understand how environmental change has influenced the growth and development of iconic reef systems such as the Great Barrier Reef. The findings presented here have helped reef managers set water quality targets and input into future “catchment to coast” management strategies.
Title: Drought-induced mortality in plants: Night-time water loss, embolism refilling and repair. Plus, Impacts of drought & heat waves on human health.
Abstract: This talk will describe the impacts of drought, across a non-linear career. I will describe plant traits involved in avoiding or tolerating drought-induced mortality, in the Southern and Northern hemispheres, including consequences and possible mechanistic causes of nocturnal water loss, xylem embolism refilling following rewatering, and resprouting in plants following fire and drought, concluding with a multi-species examination of which species and traits use which carbohydrates and hydraulic traits to avoid drought-induced mortality. Next, having transitioned to a career in genomics, I'll describe work involving quantifying human health impacts following heat waves and droughts. I’ll discuss tips on managing a non-linear career, and how to transition from one interesting field to another fun and interesting field within academia.
Title: Forests and water - advances and controversies.
Abstract: Reliable water is essential for most human activities, but more than half the world's population suffer from water scarcity. Recent research has increased our understanding of how trees and forests influence water availability. Nonetheless major controversies remain. For example, new research suggests that forests and trees play a much greater role in maintaining global rainfall patterns than was previously realized. Is this really a whole new value for forests? Come and decide for yourselves. (The talk is aimed at a general audience and will not assume technical knowledge).
Title: The evolutionary ecology of toxin synthesis in eukaryotic microalgae
Abstract: Particular groups and species of eukaryotic microalgae frequently become highly abundant and dominant in marine ecosystems, causing problems for the aquaculture and fishing industries, a phenomenon known as a harmful algal bloom. In Australia and internationally, marine harmful algal blooms have caused large-scale losses to shellfish aquaculture and fishing industries, with a bloom in Tasmania in 2012 resulting in ~$23 million in damages, while internationally, a 2016 bloom in Chile caused losses of ~$800 M. The causes of the numerical dominance of harmful marine microalgae do not appear to relate to their growth or nutrient uptake rates, as they are frequently much slower growing and less efficient at nutrient uptake compared to other phytoplankton. The production of an unprecedented array of chemical compounds, some of which have allelopathic, anti-predator, and other toxic impacts, may be the factors enabling their proliferation, known as the ‘watery arms race’. Research into the evolution of dinoflagellates; an increased understanding of their toxicology; and the use of high throughput sequencing and gene expression studies to identify genes involved in toxin production, are now enabling us to piece together the evolution of toxicity in marine microalgae. In this talk, the molecular evolution of polyketide and other secondary metabolite toxins in marine microalgae will be discussed. Gene duplication, gene loss, selection, and lateral transfer all appear to have played a role in the evolution of harmful algal toxins. The application of information on the genetics of harmful algal toxicity to the seafood industry will be outlined.
Title: Decentralized mechanisms of collective behavior in social insects
Abstract: Social insects are paradigms of decentralized organization. Complex colony traits emerge from the interactions of many leaderless workers, each applying appropriate decision rules to limited local information. In this talk, I will describe efforts to understand this process, using two model systems: cooperative transport of large food items by the ant Novomessor cockerelli, and recruitment communication during collective nest site choice by the ant Temnothorax rugatulus. Both systems were targeted with a combination of experimentation and mathematical models. For cooperative transport, we used teams of robots to explore how highly variable ants regulate to a common speed to prevent dissolution of their group. A reinforcement learning algorithm allowed the robots to adaptively adjust individual speed to that of the slowest member, despite each robot having no knowledge of team size and composition. For collective decision-making, we applied information theory to decipher the communication tactics of scout ants that show other ants the routes to promising new homes. This analysis overturned our initial expectation of one-way transfer from informed leader to naïve follower. Instead, we found that followers also signal to their recruiters in order to control the flow of route information, thus enhancing their ability to learn it. These studies show the power of diverse analytical and modeling tools for understanding biological collectives
Title: Breaking Good – making medicines with high school and undergraduate students
Abstract:The Open Source Malaria (OSM) consortium has been pioneering open source drug discovery since 2011. The aim of the project is to find a small molecule that is effective for the treatment of malaria using open science principles.All experiments are published on the Internet in electronic lab notebooks, all data are available for anyone to use and there will be no patents. One of the many advantages of this open approach is that barriers to participation are much lower than for traditional drug discovery projects.The unique features of OSM have enabled us to develop a chemical education and citizen science project, Breaking Good, whereby undergraduates and even high school students can take part in a real research project and synthesise new drug targets.Over the past few years, undergraduates in the USA, NZ, UK and Australia have all worked on the synthesis of novel antimalarials and some of the molecules made show promising activity against Plasmodium falciparum. Additionally, a class at a local high school have contributed to OSM and in 2019, they synthesised the price-hiked toxoplasmosis medicine, Daraprim, in their high school laboratory.In this talk, Dr Alice Motion will describe efforts to increase inquiry-based learning and provision for exciting and informative practical science and progress in the expansion of Breaking Good through platform development, training and crowd-funding to ensure that the project is sustainable.
Title: Honey bee viruses: Cause or consequence of colony collapse?
Abstract: The last century has seen dramatic changes in the management and distribution of honey bees, bringing along a cocktail of novel stressors such as pesticides and diseases. Chief among these is the ectoparasitic mite, Varroa destructor. The emergence and global spread of Varroa has had a major impact on the health of honey bee populations worldwide. One of the most striking observations is the concurrent increase in levels of Deformed wing virus (DWV), a previously innocuous virus of honey bees, now considered to be the ultimate cause of colony loss once Varroa becomes established in a population. But the link between colony losses, Varroa and the viruses that it spreads remains correlational. The novel association between honey bees and Varroa has led to many instances of rapid co-evolution, where isolated populations have developed mechanisms to overcome the parasitic burden of mites. However, if honey bee deaths are due to particular viruses, we might expect Varroa-resistant bee populations to exhibit different viral landscapes compared to sensitive bees. Here, I show that virus diversity in Varroa-tolerant honey bees is complex; in some cases involving extreme virus levels, strain recombination and novel virus species. I show that transmission route, immune response and viral virulence all contribute to the complex host-parasite interaction between bees and mites, leaving us with the question: are viruses the true culprit behind bee declines? If so, how can we stop them?
Title: Spines, Sprays, and Shields: The Evolution of Prey Defenses and Aposematism in Mammals
Abstract: Many species have evolved elaborate physical defenses (armor, spines, noxious sprays, toxins) to avoid predation and stay safe. The factors that influence why such defenses evolve are less clear, but exposure to predators clearly serves as a strong source of selection. Using comparative evolutionary analyses and behavioral research on wild skunks and coyotes, we can understand how and why defenses evolve, how having a defense influences risk assessment and fear, and how predators learn about warning coloration and prey defenses. Dr. Stankowich will discuss his research on why and how defenses have evolved in mammals (e.g., armadillos, pangolins, skunks, porcupines), and what the consequences have been to the other aspects of their lives, including their perceptions of fear and cognitive ability.
Title: Life in the City: how nature persists in urban environments and why it matters
Abstract: We often think of cities as concrete wastelands, where humans and their structures dominate and degrade our natural systems. The reality is that a surprising number of animals and plants manage to persist in cities. Some even thrive, seemingly better off in our modern cities than in their natural habitats. I will outline the ways in which animals and plants respond to ecological pressures as diverse as habitat loss, pollution, and exotic invasion, identifying how ecological interactions can be maintained in these highly modified urban systems. I will also discuss the human dimension of urban ecology, identifying how promoting biodiversity in these degraded systems enhances wellbeing and the ultimate sustainability of cities.
Title: How do ecological interactions alter energy use and what are the consequences for community function?
Abstract: A key goal of ecology is to make predictions across levels of ecological organisation. How much energy an organism uses can be used to make inferences across scales and could be a valuable tool to predict how energy fluxes will change with warming temperatures. But given the rarity of experimental tests it remains unclear whether individual rates are sufficient to predict the functioning of whole populations and communities. In other words, is energy flow simply the sum of individual rates or the more complex product of species interactions? I will present work that explores how competitive interactions modify the intake and use of resources in populations and communities. I will then discuss how competition can change energy fluxes of whole communities, altering their stability and function.
Title: Molecular diversification of the seminal fluid proteome in a recently diverged passerine species pair.
Abstract: Seminal fluid (SF) proteins have diverse roles in a range of reproductive processes, including sperm maturation and function, female post-mating behaviour, and ovulation. SF proteins also mediate gamete interactions and fertilization, suggesting they may contribute to reproductive barriers between diverging lineages. Nevertheless, our knowledge of SF divergence, particularly in models for speciation, is limited. In this talk, I will discuss my research into the molecular differentiation of seminal fluid in a two species of Passer sparrow - the house sparrow (Passer domesticus) and Spanish sparrow (P. hispaniolensis). Using a combination of proteomics and comparative evolutionary genomics, I identified and compared the SF proteome of the two sparrow species, and included 11 species in a multiple sequence alignment to examine molecular evolution of SF proteins in passerine birds more generally. Finally, using whole genome resequencing data, I assessed genomic differentiation between the two species in SF genes. I will present the results of this work, and discuss these findings in the context of barriers to reproduction between the species and the potential role of male ejaculates in reproductive isolation.
Title: Real time science to engage students (and why video games are the future)
Abstract: Are you reading this? Oh wow! Okay. I didn't people actually read abstracts. Ummm... I guarantee this talk won't be anything like what you're used to. That may be good or bad, depending on what you're used to though. So I should say that my goal here will be to chat about science and how games and apps can be used to perform experiments live in the classroom. This is real-time stuff I'm talking about here. Forget flipped classrooms - this is next level! I'll talk about how this has the potential to change science education, science communication, and more importantly, how this approach can be used to improve diversity and equity in science. I'll also talk a little about my research on human evolution and how this can inform education and diversity in science. Hope to see you there!
Title: Sex specific plasticity in life-history and the mating system of Nephila senegalensis
Abstract: The genus Nephila is well known for its extremes, such as the extreme size differences between the sexes, their extremely large golden orb-webs and their curious adaptions to an unusual mating system such as regular sexual cannibalism, mate plugging, male emasculation, one-shot genitalia and spermatogenesis that terminates at maturation. However, species differ in presence-absence and the combination of the above traits. I will present data from several experiments on Nephila senegalensis from Southern Africa, a species with a pronounced reversed sexual dimorphism and a very large variation within the sexes. Using controlled feeding studies in a split-brood design we explore the causes and fitness consequences of this variation and shed some light on sex-specific selection pressures. Staged mating competition between two males from different size classes revealed balanced paternity gains of large, medium and small males although achieved by different means. Genital damage does not occur in N. senegalensis and males can mate repeatedly although they can only charge their pedipalps once. Hence, while males have a potentially unlimited mating rate, the limitation in sperm supplies opens the scene for curious sperm investment strategies explained to some degree by interactions between male and female body sizes. The recent discovery of endosymbiotic bacteria that seem to influence crucial selection parameters such as sex ratio but also growth, adds another level of complexity to this fascinating study system.
Title: Deconstructing a visual signal: An exploration of the wing-waving display in tephritid flies against their jumping spider predators
Abstract: Pursuit deterrence signals are sent by prey to ward off or spoil an attack from potential predators. These signals can benefit both prey and predator, since prey survive a potential attack and predators conserve energy and potentially avoid damage caused by an alert prey. Some flies of the family Tephritidae perform wing displays to jumping spider predators, and thereby escape predation. In this talk, I will use this model system to explore several issues in visual ecology to understand the mechanisms and function of an unusual signal, using a combination of behavioural experiments, spider retinal eye-tracking and visual modelling.
Title: From individual to collective building in social insects.
Abstract: Social insects, such as ants and termites are capable of building large networks of foraging trails and nests with complex architecture. We know that the construction of these structures is mediated by self-organisation processes, whereby the final structure 'emerges' from multiple interactions of the insects with each other and with their environment. However, it is not until recently that we have started to get a better understanding of the fine-scale organisation of the built structures and of the individual-level rules of behaviour that mediate their construction. In my talk I will illustrate with some examples from ants and termites how relatively complex forms can be generated by simple rules.
Title: Humanity’s fascination with death and the supernatural has influenced science for centuries.
Abstract: The desire to overcome death and understand the strange and unusual of the human condition has inspired many scientists throughout history, particularly within the fields of anatomy and medicine. At this special seminar, Leslie New, PhD, assistant professor of statistics at WSU Vancouver, will take us on a tour of some of the weirdest specimens from museum collections in the western world and describe how scientists through the centuries have tried to understand death and the afterlife. Come join us for a walk through the more macabre corners of science.
Her research interests focus of the use of hierarchical Bayesian state-space models to study species interactions with the environment, other species and con-specifics. State-space models are particularly advantageous for ecological modelling, since they enable the direct inclusion of uncertainty associated with data collection and natural stochasticity. She is interested in using state-space, and other relevant statistical models, to investigate how changes in individual behavior due to disturbance, either anthropogenic or natural, can affect population dynamics. This can improve our understanding of species’ response to management and conservation initiative under various social, economic and environmental systems, as well as the sustainability of human activities. Her current research is focused on estimating the impact of wind facilities on eagles in the United States and the effectiveness of Marine Protected Areas in reducing the impacts of anthropogenic noise on cetaceans in the North Atlantic Ocean.
Title: Understanding the Carbon and Water economy in plants
Abstract: Plants absorb CO2 from the atmosphere for photosynthesis at the expenses of losing water through transpiration. Articulating this trade-off across environmental conditions remains as a major challenge in modelling optimal plant behavior and largely limited by our ability for quantifying those fluxes at the appropriate spatial (plant scale) and temporal (from seconds to hours, day and seasons) scales. In this talk, I will discuss emerging opportunities from ecosystem-scale eddy covariance fluxes for improving our theoretical understanding going forward.